TRIMETHYLAMINURIA

trimethylaminuria lexicon

Trimethylaminuria
A metabolic disorder affecting people who inherit two copies of an altered FMO3 gene. Patients emit a foul odor resembling of rotten fish through their bodies' excretions (Sweat, breath, urine, saliva). For this reason, the condition is known as the fish odor syndrome.
TMA
Trimethyamine is an organic compound with the formula N(CH3)3. This colorless, hygroscopic, and flammable tertiary amine has a strong "fishy" odor in low concentrations and an ammonia-like odor at higher concentrations.
Gut microbial metabolism of choline results in the production of trimethylamine (TMA).
Trimethylaminuria is an autosomal recessive disorder involving a trimethylamine oxidase deficiency.
TMAO
Trimethylamine N-oxide (TMAO) is the organic compound in the class of amine oxides with the formula (CH3)3NO. It results from the oxidation of trimethylamine. It is colorless and non odorous.
N-oxygenation
Is the process by which the metabolism converts trimethylamine (TMA) from precursor compounds in food digestion into trimethylamine oxide (TMAO). In case of trimethylaminuria, this mechanism is either impaired or totally faulty.
Body Odor
Body odor has its origin from skin glands secretions substances. Diet, psychological conditions and bacterial behavior are the main factors considered as influencing the body odor, especially in axillary and genital regions where odors are more intense.
Smell
The smell is a scent perceived by the sense of olfaction. It represents both pleasant (fragrance, perfume) and unpleasant odors (malodor, stench, stink).
Rotten eggs odor is classified as putrid.
Condition
A medical condition is the state of the body when his normal functioning is impaired. The term is used to designate an handicap or a disease.
Syndrome
A syndrome is the set of symptoms and signs that characterize a condition, often linked each other.
Ammonia
Ammonia is a compound of nitrogen and hydrogen with the formula NH3. It is a colorless gas with a characteristic pungent smell. Ammonia is caustic and hazardous.
DNA
DNA is a double stranded polymer molecule coiled around each other to form a double helix and linked by hydrogen bonds. DNA is a nucleic acid that contains bases of four types : A (Adenine) C (Citosine) T (Thymine) G (Guanine).
Most of genetic information located in DNA which is considered as the blueprint of life and a kind of instruction manual.
Strands are complementary, A always matches T, and C matches G; The sequence of nucleobasis (ATCG) constitute a unique genetic code for every human being.
DNA is the material chromosomes are made of. Humans have 23 pairs of chromosomes.
Genetic mutation
In biology, a mutation is a permanent change of the DNA or other genetic elements and resulting from errors in the process of replication, or from the insertion or deletion of segments of DNA by mobile genetic elements. Mutations may or may not produce discernible changes in the observable characteristics (phenotype) of an organism.
Mutations in genes can either have no effect, alter the product of a gene, or prevent the gene from functioning properly or completely.
Genetic mutations occuring in the FMO3 gene may affect enzyme activity which could be reduced or abolished. In this case, the subject would be tested positive to trimethylaminuria.

Mutations affecting FMO3 gene (9 exons, 532 amino-acids)

Mutations highlighted with red cause trimethylaminuria
E24D
E32K
I37T

H46N
R51G
A52T
V58I
N61S
N61K
E65R
M66I
P70L
M82T

N114S
D132H
V143E
G148X
H149Y
P153L
E158K

S173R
G180V
V187A
S195L
C197X
D198E
I199T
T201K
R205C

R223Q
R238Q
R238P
V257M
M260V

E305X
E308G
E314X
L360P
E362Q
R387L
W388X
G395E
K416I

K416N

G421V
M434I
I441T
Q470X
G475D
T488A
R492W
R500X
Metabolic disorder
A metabolic disorder can happen when abnormal chemical reactions in the body alter the normal metabolic process. It can also be defined as inherited single gene anomaly, most of which are autosomal recessive (like in the case of trimethylaminuria).
Choline
Choline is a water-soluble nutrient essential for human life. Gut microbial metabolism of choline results in the production of trimethylamine (TMA), which upon absorption by the host is converted in the liver to trimethylamine-N-oxide (TMAO).
FMO3
FMO3 (Flavin Containing Monooxygenase 3), the major FMO expressed in adult liver, is a Protein Coding gene. It has the capacity to oxygenate xenobiotics including trimethylamine.
Mutations in this gene could result in trimethylaminuria.
Gene
A gene is a segment of DNA that is passed down from parents to children and confers a trait to the offspring. A gene is a part of DNA that codes for a specified protein. Human possesses around 20,000 to 25,000 genes.
While genes account for 3% of DNA, the 97% rest in still unknown.
The chromosome 1, where the FMO3 gene is located (at the position 1q24.3), contains about 8000 genes.
Protein
A protein is a large molecule consisting in a sequence of amino acids and has a specified function within living organisms.
Probiotics
Probiotics are a kind of healthy (host-friendly/beneficial) bacteria (living micro-organisms) that enhance immune system and reduce gastrointestinal discomfort.
Enzyme
An enzyme is a macromolecular catalyst that accelerates the chemical transformation of substrates into products without being consumed in the reaction.
An enzyme's activity decreases markedly outside its optimal temperature and pH.
Amino acid
We can find twenty different amino acids in proteins. The set of amino-acids forms a protein. The protein coded by the FMO3 gene contains 532 amino acids.
DesignationOne letter codificationThree letters codification
alaninealaA
arginineargR
asparagineasnN
aspartic acidaspD
cysteinecysC
glutamineglnQ
glutamic acidgluE
glycineglyG
histidinehisH
isoleucineileI
leucineleuL
lysinelysK
methioninemetM
phenylalaninepheF
prolineproP
serineserS
threoninethrT
tryptophantrpW
tyrosinetyrY
valinevalV
Codon
A Codon is a sequence of three nucleotides and is translated into one amino-acid.
Exon
An exon is a fragment of DNA. FMO3 gene has nine exons.
pH
pH is a numeric scale ranging from 1 to 14 and used to specify the acidity or alkalinity of an aqueous solution. It is an indication of the hydorgen ion concentration of a solution.
the lower the pH of a given solution (i.e. the higher the H+ concentration as pH = -log[H+]), the stronger is its acidity.
A solution with a pH equals to 7 is neutral.
Rioflavin
Riboflavin, commonly called Vitamin B2, is used as a supplement in diets.
Diet
Transcription
Recessive
Excretion
Antibiotic
Activated charcoal
Chlorophyll
Free Web Hosting